HL_6O9K_083

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

6O9K|1|a|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9K_083 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.3576

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6O9K|1|a|G|462
6O9K|1|a|U|463
6O9K|1|a|U|464
6O9K|1|a|A|465
6O9K|1|a|A|466
6O9K|1|a|U|467
6O9K|1|a|A|468
6O9K|1|a|C|469
6O9K|1|a|C|470

Current chains

Chain a

16S rRNA

Nearby chains