HL_6O9K_084

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9K_084 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2854

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6O9K|1|a|C|522
6O9K|1|a|A|523
6O9K|1|a|G|524
6O9K|1|a|C|525
6O9K|1|a|C|526
6O9K|1|a|G|527

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12