HL_6OF1_232

3D structure

PDB id

6OF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGGACGGAAAUCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OF1|1|2A|G|2302
6OF1|1|2A|G|2303
6OF1|1|2A|G|2304
6OF1|1|2A|A|2305
6OF1|1|2A|C|2306
6OF1|1|2A|G|2307
6OF1|1|2A|G|2308
6OF1|1|2A|A|2309
6OF1|1|2A|A|2310
6OF1|1|2A|A|2311
6OF1|1|2A|U|2312
6OF1|1|2A|C|2313
6OF1|1|2A|C|2314

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2B

5S ribosomal RNA; 5S rRNA

Chain 2G

50S ribosomal protein L5