HL_6OF6_067

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCCCACCAGC

Length

10 nucleotides

Bulged bases

6OF6|1|RA|A|887, 6OF6|1|RA|C|888

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_067 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.5232

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OF6|1|RA|G|883
6OF6|1|RA|C|884
6OF6|1|RA|C|885
6OF6|1|RA|C|886
6OF6|1|RA|A|887
6OF6|1|RA|C|888
6OF6|1|RA|C|889
6OF6|1|RA|A|890
6OF6|1|RA|G|892
6OF6|1|RA|C|893

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QY

Transfer RNA; tRNA