HL_6OF6_106

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_106 not in the Motif Atlas

Geometric match to HL_2R8S_001

Geometric discrepancy: 0.1389

The information below is about HL_2R8S_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6OF6|1|RA|C|2658
6OF6|1|RA|G|2659
6OF6|1|RA|A|2660
6OF6|1|RA|G|2661
6OF6|1|RA|A|2662
6OF6|1|RA|G|2663

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RH

50S ribosomal protein L6