3D structure

PDB id
6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GUCUC
Length
5 nucleotides
Bulged bases
6OF6|1|XA|U|841, 6OF6|1|XA|C|842, 6OF6|1|XA|U|843
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OF6_131 not in the Motif Atlas
Homologous match to HL_6CZR_089
Geometric discrepancy: 0.5221
The information below is about HL_6CZR_089
Detailed Annotation
Mini UNCG
Broad Annotation
No text annotation
Motif group
HL_48778.1
Basepair signature
cWW-F
Number of instances in this motif group
51

Unit IDs

6OF6|1|XA|G|838
6OF6|1|XA|U|841
6OF6|1|XA|C|842
6OF6|1|XA|U|843
6OF6|1|XA|C|848

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XB
30S ribosomal protein S2

Coloring options:


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