HL_6OF6_166

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUCGUGGAGC

Length

11 nucleotides

Bulged bases

6OF6|1|YA|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_166 not in the Motif Atlas

Homologous match to HL_7RQB_013

Geometric discrepancy: 0.1097

The information below is about HL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6OF6|1|YA|G|382
6OF6|1|YA|U|383
6OF6|1|YA|U|384
6OF6|1|YA|C|385
6OF6|1|YA|G|386
6OF6|1|YA|U|387
6OF6|1|YA|G|388
6OF6|1|YA|G|389
6OF6|1|YA|A|390
6OF6|1|YA|G|391
6OF6|1|YA|C|392

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15