HL_6OF6_177

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

6OF6|1|YA|A|781, 6OF6|1|YA|A|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_177 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3263

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6OF6|1|YA|U|779
6OF6|1|YA|G|780
6OF6|1|YA|A|781
6OF6|1|YA|A|782
6OF6|1|YA|A|783
6OF6|1|YA|A|784
6OF6|1|YA|G|785

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YD

50S ribosomal protein L2