HL_6OFX_073

3D structure

PDB id

6OFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-rotated ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGGAAACG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OFX_073 not in the Motif Atlas

Geometric match to HL_7A0S_056

Geometric discrepancy: 0.309

The information below is about HL_7A0S_056

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_45359.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6OFX|1|3|U|157
6OFX|1|3|G|158
6OFX|1|3|G|159
6OFX|1|3|A|160
6OFX|1|3|A|161
6OFX|1|3|A|162
6OFX|1|3|C|163
6OFX|1|3|G|164

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain Y

30S ribosomal protein S20

Chain p

50S ribosomal protein L19