HL_6OFX_082

3D structure

PDB id

6OFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-rotated ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

6OFX|1|3|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OFX_082 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.23

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6OFX|1|3|G|462
6OFX|1|3|U|463
6OFX|1|3|U|464
6OFX|1|3|A|465
6OFX|1|3|A|466
6OFX|1|3|U|467
6OFX|1|3|A|468
6OFX|1|3|C|469
6OFX|1|3|C|470

Current chains

Chain 3

16S ribosomal RNA

Nearby chains