3D structure

PDB id
6OFX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Non-rotated ribosome (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GUCCGGC
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OFX_095 not in the Motif Atlas
Homologous match to HL_6CZR_097
Geometric discrepancy: 0.308
The information below is about HL_6CZR_097
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OFX|1|3|G|1134
6OFX|1|3|U|1135
6OFX|1|3|C|1136
6OFX|1|3|C|1137
6OFX|1|3|G|1138
6OFX|1|3|G|1139
6OFX|1|3|C|1140

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain N
30S ribosomal protein S9

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1626 s