HL_6OG7_028

3D structure

PDB id

6OG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OG7_028 not in the Motif Atlas

Homologous match to HL_7RQB_030

Geometric discrepancy: 0.3824

The information below is about HL_7RQB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OG7|1|1|C|1092
6OG7|1|1|G|1093
6OG7|1|1|U|1094
6OG7|1|1|A|1095
6OG7|1|1|A|1096
6OG7|1|1|U|1097
6OG7|1|1|A|1098
6OG7|1|1|G|1099

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 8

Peptide chain release factor RF2

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6