HL_6OG7_034

3D structure

PDB id

6OG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6OG7|1|1|U|1396, 6OG7|1|1|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OG7_034 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.2007

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6OG7|1|1|G|1389
6OG7|1|1|U|1390
6OG7|1|1|U|1391
6OG7|1|1|A|1392
6OG7|1|1|A|1393
6OG7|1|1|U|1394
6OG7|1|1|A|1395
6OG7|1|1|U|1396
6OG7|1|1|U|1397
6OG7|1|1|C|1398

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain t

50S ribosomal protein L23