HL_6OG7_082

3D structure

PDB id

6OG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

6OG7|1|3|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OG7_082 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2484

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6OG7|1|3|G|462
6OG7|1|3|U|463
6OG7|1|3|U|464
6OG7|1|3|A|465
6OG7|1|3|A|466
6OG7|1|3|U|467
6OG7|1|3|A|468
6OG7|1|3|C|469
6OG7|1|3|C|470

Current chains

Chain 3

16S ribosomal RNA

Nearby chains