3D structure

PDB id
6OG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
6OG7|1|3|U|209, 6OG7|1|3|C|210
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OG7_112 not in the Motif Atlas
Homologous match to HL_5J7L_005
Geometric discrepancy: 0.557
The information below is about HL_5J7L_005
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

6OG7|1|3|C|207
6OG7|1|3|U|208
6OG7|1|3|U|209
6OG7|1|3|C|210
6OG7|1|3|G|211
6OG7|1|3|G|212

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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