HL_6OGF_106
3D structure
- PDB id
- 6OGF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUAC
- Length
- 51 nucleotides
- Bulged bases
- 6OGF|1|1|A|2126, 6OGF|1|1|U|2132, 6OGF|1|1|C|2145, 6OGF|1|1|C|2146, 6OGF|1|1|A|2147, 6OGF|1|1|A|2158, 6OGF|1|1|C|2161, 6OGF|1|1|C|2165, 6OGF|1|1|U|2166, 6OGF|1|1|G|2168, 6OGF|1|1|A|2171, 6OGF|1|1|U|2172, 6OGF|1|1|A|2173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGF|1|1|G|2124
6OGF|1|1|G|2125
6OGF|1|1|A|2126
6OGF|1|1|G|2127
6OGF|1|1|G|2128
6OGF|1|1|C|2129
6OGF|1|1|U|2130
6OGF|1|1|U|2131
6OGF|1|1|U|2132
6OGF|1|1|G|2133
6OGF|1|1|A|2134
6OGF|1|1|A|2135
6OGF|1|1|G|2136
6OGF|1|1|U|2137
6OGF|1|1|G|2138
6OGF|1|1|U|2139
6OGF|1|1|G|2140
6OGF|1|1|G|2141
6OGF|1|1|A|2142
6OGF|1|1|C|2143
6OGF|1|1|G|2144
6OGF|1|1|C|2145
6OGF|1|1|C|2146
6OGF|1|1|A|2147
6OGF|1|1|G|2148
6OGF|1|1|U|2149
6OGF|1|1|C|2150
6OGF|1|1|U|2151
6OGF|1|1|G|2152
6OGF|1|1|C|2153
6OGF|1|1|A|2154
6OGF|1|1|U|2155
6OGF|1|1|G|2156
6OGF|1|1|G|2157
6OGF|1|1|A|2158
6OGF|1|1|G|2159
6OGF|1|1|C|2160
6OGF|1|1|C|2161
6OGF|1|1|G|2162
6OGF|1|1|A|2163
6OGF|1|1|C|2164
6OGF|1|1|C|2165
6OGF|1|1|U|2166
6OGF|1|1|U|2167
6OGF|1|1|G|2168
6OGF|1|1|A|2169
6OGF|1|1|A|2170
6OGF|1|1|A|2171
6OGF|1|1|U|2172
6OGF|1|1|A|2173
6OGF|1|1|C|2174
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L1
Coloring options: