HL_6OJ2_023
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCGCGAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OJ2_023 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.2234
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
6OJ2|1|QA|C|1028|||A
6OJ2|1|QA|C|1028|||B
6OJ2|1|QA|G|1029
6OJ2|1|QA|C|1030
6OJ2|1|QA|G|1031
6OJ2|1|QA|A|1032
6OJ2|1|QA|G|1032|||A
6OJ2|1|QA|G|1032|||B
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: