HL_6OJ2_069

3D structure

PDB id

6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6OJ2|1|RA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OJ2_069 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.4874

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6OJ2|1|RA|C|1064
6OJ2|1|RA|U|1065
6OJ2|1|RA|U|1066
6OJ2|1|RA|A|1067
6OJ2|1|RA|G|1068
6OJ2|1|RA|A|1069
6OJ2|1|RA|A|1070
6OJ2|1|RA|G|1071
6OJ2|1|RA|C|1072
6OJ2|1|RA|A|1073
6OJ2|1|RA|G|1074

Current chains

Chain RA

23S rRNA

Nearby chains