HL_6OJ2_110

3D structure

PDB id

6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OJ2_110 not in the Motif Atlas

Homologous match to HL_7RQB_069

Geometric discrepancy: 0.0844

The information below is about HL_7RQB_069

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6OJ2|1|RA|C|2856
6OJ2|1|RA|G|2857
6OJ2|1|RA|C|2858
6OJ2|1|RA|G|2859
6OJ2|1|RA|A|2860
6OJ2|1|RA|G|2861

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RT

50S ribosomal protein L19