HL_6OJ2_157

3D structure

PDB id

6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

6OJ2|1|YA|U|162

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OJ2_157 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2428

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6OJ2|1|YA|C|155
6OJ2|1|YA|U|161
6OJ2|1|YA|U|162
6OJ2|1|YA|G|171

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28