HL_6OJ2_212
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGUGUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6OJ2|1|YA|U|2406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OJ2_212 not in the Motif Atlas
- Homologous match to HL_7RQB_059
- Geometric discrepancy: 0.0766
- The information below is about HL_7RQB_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40210.2
- Basepair signature
- cWW-tSH-F
- Number of instances in this motif group
- 12
Unit IDs
6OJ2|1|YA|C|2404
6OJ2|1|YA|G|2405
6OJ2|1|YA|U|2406
6OJ2|1|YA|G|2407
6OJ2|1|YA|U|2408
6OJ2|1|YA|G|2409
6OJ2|1|YA|G|2410
6OJ2|1|YA|A|2411
6OJ2|1|YA|A|2412
6OJ2|1|YA|G|2413
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y1
- 50S ribosomal protein L28
- Chain YP
- 50S ribosomal protein L15
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