HL_6OLI_102
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GACAGAAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLI_102 not in the Motif Atlas
- Homologous match to HL_5TBW_056
- Geometric discrepancy: 0.2344
- The information below is about HL_5TBW_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_72777.1
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6OLI|1|t|G|4212
6OLI|1|t|A|4213
6OLI|1|t|C|4214
6OLI|1|t|A|4215
6OLI|1|t|G|4216
6OLI|1|t|A|4217
6OLI|1|t|A|4218
6OLI|1|t|A|4219
6OLI|1|t|C|4220
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain L
- 60S ribosomal protein L11
- Chain u
- Transfer RNA; tRNA
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