HL_6OLI_120
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUUCGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 6OLI|1|u|C|56
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLI_120 not in the Motif Atlas
- Homologous match to HL_6ORD_037
- Geometric discrepancy: 0.4536
- The information below is about HL_6ORD_037
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 143
Unit IDs
6OLI|1|u|G|53
6OLI|1|u|U|54
6OLI|1|u|U|55
6OLI|1|u|C|56
6OLI|1|u|G|57
6OLI|1|u|A|58
6OLI|1|u|U|59
6OLI|1|u|U|60
6OLI|1|u|C|61
Current chains
- Chain u
- tRNA
Nearby chains
- Chain K
- 60S ribosomal protein L10
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
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