HL_6OLI_127

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCCCGGAGCGCU

Length

13 nucleotides

Bulged bases

6OLI|1|S2|A|1781, 6OLI|1|S2|C|1783

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|S2|G|1748
6OLI|1|S2|G|1749
6OLI|1|S2|C|1750
6OLI|1|S2|C|1751
6OLI|1|S2|C|1752
6OLI|1|S2|G|1779
6OLI|1|S2|G|1780
6OLI|1|S2|A|1781
6OLI|1|S2|G|1782
6OLI|1|S2|C|1783
6OLI|1|S2|G|1784
6OLI|1|S2|C|1785
6OLI|1|S2|U|1786

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SG

40S ribosomal protein S6