HL_6OLZ_005

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUCUGAUCG

Length

10 nucleotides

Bulged bases

6OLZ|1|A2|U|206

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_005 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3094

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

6OLZ|1|A2|C|199
6OLZ|1|A2|U|200
6OLZ|1|A2|U|201
6OLZ|1|A2|C|202
6OLZ|1|A2|U|203
6OLZ|1|A2|G|204
6OLZ|1|A2|A|205
6OLZ|1|A2|U|206
6OLZ|1|A2|C|207
6OLZ|1|A2|G|208

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AC

60S ribosomal protein L4

Chain AY

60S ribosomal protein L26

Chain Ae

60S ribosomal protein L32