HL_6OLZ_021

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCCGCGCC

Length

8 nucleotides

Bulged bases

6OLZ|1|A2|C|1463, 6OLZ|1|A2|G|1464, 6OLZ|1|A2|C|1467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_021 not in the Motif Atlas

Geometric match to HL_5J7L_018

Geometric discrepancy: 0.2888

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

6OLZ|1|A2|G|1461
6OLZ|1|A2|C|1462
6OLZ|1|A2|C|1463
6OLZ|1|A2|G|1464
6OLZ|1|A2|C|1465
6OLZ|1|A2|G|1466
6OLZ|1|A2|C|1467
6OLZ|1|A2|C|1468

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AL

60S ribosomal protein L13

Chain Ai

60S ribosomal protein L36