HL_6OLZ_031

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGUAACAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_031 not in the Motif Atlas

Homologous match to HL_5TBW_028

Geometric discrepancy: 0.4886

The information below is about HL_5TBW_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6OLZ|1|A2|G|1986
6OLZ|1|A2|U|1987
6OLZ|1|A2|G|1988
6OLZ|1|A2|U|1989
6OLZ|1|A2|A|1990
6OLZ|1|A2|A|1991
6OLZ|1|A2|C|1992
6OLZ|1|A2|A|1993
6OLZ|1|A2|A|1994
6OLZ|1|A2|C|1995

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain Am

60S ribosomal protein L40