HL_6OLZ_051

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGCGGCG

Length

7 nucleotides

Bulged bases

6OLZ|1|A2|C|3641, 6OLZ|1|A2|G|3642, 6OLZ|1|A2|C|3644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_051 not in the Motif Atlas

Homologous match to HL_8C3A_047

Geometric discrepancy: 0.3513

The information below is about HL_8C3A_047

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6OLZ|1|A2|C|3639
6OLZ|1|A2|G|3640
6OLZ|1|A2|C|3641
6OLZ|1|A2|G|3642
6OLZ|1|A2|G|3643
6OLZ|1|A2|C|3644
6OLZ|1|A2|G|3645

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain AN

60S ribosomal protein L15