HL_6OLZ_072

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGAAAGGC

Length

8 nucleotides

Bulged bases

6OLZ|1|A2|A|4868, 6OLZ|1|A2|A|4869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_072 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.1022

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

6OLZ|1|A2|G|4865
6OLZ|1|A2|G|4866
6OLZ|1|A2|A|4867
6OLZ|1|A2|A|4868
6OLZ|1|A2|A|4869
6OLZ|1|A2|G|4870
6OLZ|1|A2|G|4871
6OLZ|1|A2|C|4872

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AO

60S ribosomal protein L13a