HL_6OLZ_073

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUAGACGAC

Length

9 nucleotides

Bulged bases

6OLZ|1|A2|U|4934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_073 not in the Motif Atlas

Geometric match to HL_5J7L_201

Geometric discrepancy: 0.2188

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6OLZ|1|A2|G|4933
6OLZ|1|A2|U|4934
6OLZ|1|A2|A|4935
6OLZ|1|A2|G|4936
6OLZ|1|A2|A|4937
6OLZ|1|A2|C|4938
6OLZ|1|A2|G|4939
6OLZ|1|A2|A|4940
6OLZ|1|A2|C|4941

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AP

60S ribosomal protein L17

Chain Ad

60S ribosomal protein L31