HL_6OLZ_084

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUCGCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_084 not in the Motif Atlas

Geometric match to HL_4LFB_022

Geometric discrepancy: 0.2512

The information below is about HL_4LFB_022

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

6OLZ|1|B1|U|197
6OLZ|1|B1|U|198
6OLZ|1|B1|C|199
6OLZ|1|B1|G|200
6OLZ|1|B1|C|201
6OLZ|1|B1|G|202

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BI

40S ribosomal protein S8