HL_6OLZ_095

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_095 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.1338

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6OLZ|1|B1|C|618
6OLZ|1|B1|A|619
6OLZ|1|B1|G|620
6OLZ|1|B1|C|621
6OLZ|1|B1|C|622
6OLZ|1|B1|G|623

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BX

40S ribosomal protein S23

Chain Bx

mRNA