HL_6OLZ_115

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUCAUAAGC

Length

9 nucleotides

Bulged bases

6OLZ|1|B1|C|1660, 6OLZ|1|B1|G|1665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_115 not in the Motif Atlas

Homologous match to HL_4V88_220

Geometric discrepancy: 0.4306

The information below is about HL_4V88_220

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6OLZ|1|B1|G|1658
6OLZ|1|B1|U|1659
6OLZ|1|B1|C|1660
6OLZ|1|B1|A|1661
6OLZ|1|B1|U|1662
6OLZ|1|B1|A|1663
6OLZ|1|B1|A|1664
6OLZ|1|B1|G|1665
6OLZ|1|B1|C|1666

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BQ

40S ribosomal protein S16

Chain BT

40S ribosomal protein S19

Chain BU

40S ribosomal protein S20

Chain Bd

40S ribosomal protein S29