Loop HL_6OLZ

3D structure

PDB id: 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description: Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

Loop

Sequence: GGGCCCAAGUCCUUCUGAUCGAGGCCCAGCCCGUGGACGGUGUGAGGCCGGUAGCGGC
Length: 58 nucleotides
Bulged bases: 6OLZ|1|A2|C|212, 6OLZ|1|A2|C|213, 6OLZ|1|A2|C|214, 6OLZ|1|A2|A|215, 6OLZ|1|A2|G|220, 6OLZ|1|A2|U|228, 6OLZ|1|A2|G|241
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6OLZ|1|A2|G|188
6OLZ|1|A2|G|189
6OLZ|1|A2|G|190
6OLZ|1|A2|C|191
6OLZ|1|A2|C|192
6OLZ|1|A2|C|193
6OLZ|1|A2|A|194
6OLZ|1|A2|A|195
6OLZ|1|A2|G|196
6OLZ|1|A2|U|197
6OLZ|1|A2|C|198
6OLZ|1|A2|C|199
6OLZ|1|A2|U|200
6OLZ|1|A2|U|201
6OLZ|1|A2|C|202
6OLZ|1|A2|U|203
6OLZ|1|A2|G|204
6OLZ|1|A2|A|205
6OLZ|1|A2|U|206
6OLZ|1|A2|C|207
6OLZ|1|A2|G|208
6OLZ|1|A2|A|209
6OLZ|1|A2|G|210
6OLZ|1|A2|G|211
6OLZ|1|A2|C|212
6OLZ|1|A2|C|213
6OLZ|1|A2|C|214
6OLZ|1|A2|A|215
6OLZ|1|A2|G|216
6OLZ|1|A2|C|217
6OLZ|1|A2|C|218
6OLZ|1|A2|C|219
6OLZ|1|A2|G|220
6OLZ|1|A2|U|221
6OLZ|1|A2|G|222
6OLZ|1|A2|G|223
6OLZ|1|A2|A|224
6OLZ|1|A2|C|225
6OLZ|1|A2|G|226
6OLZ|1|A2|G|227
6OLZ|1|A2|U|228
6OLZ|1|A2|G|229
6OLZ|1|A2|U|230
6OLZ|1|A2|G|231
6OLZ|1|A2|A|232
6OLZ|1|A2|G|233
6OLZ|1|A2|G|234
6OLZ|1|A2|C|235
6OLZ|1|A2|C|236
6OLZ|1|A2|G|237
6OLZ|1|A2|G|238
6OLZ|1|A2|U|239
6OLZ|1|A2|A|240
6OLZ|1|A2|G|241
6OLZ|1|A2|C|242
6OLZ|1|A2|G|243
6OLZ|1|A2|G|244
6OLZ|1|A2|C|245

Current chains

Chain A2: 28S ribosomal RNA

Nearby chains

Chain A3: 5.8S ribosomal RNA; 5.8S rRNA
Chain AC: 60S ribosomal protein L4
Chain AY: 60S ribosomal protein L26
Chain Ae: 60S ribosomal protein L32
Chain Aj: 60S ribosomal protein L37

HL_6OLZ_142