HL_6OM0_004
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGUUCCUCCC
- Length
- 11 nucleotides
- Bulged bases
- 6OM0|1|D|U|124, 6OM0|1|D|U|127, 6OM0|1|D|C|128
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM0_004 not in the Motif Atlas
- Geometric match to HL_5J7L_143
- Geometric discrepancy: 0.1691
- The information below is about HL_5J7L_143
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
6OM0|1|D|G|120
6OM0|1|D|G|121
6OM0|1|D|G|122
6OM0|1|D|U|123
6OM0|1|D|U|124
6OM0|1|D|C|125
6OM0|1|D|C|126
6OM0|1|D|U|127
6OM0|1|D|C|128
6OM0|1|D|C|129
6OM0|1|D|C|130
Current chains
- Chain D
- 5.8S ribosomal RNA
Nearby chains
- Chain Y
- 60S ribosomal protein L23a
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: