HL_6OM0_058
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUCGCACGAAAG
- Length
- 12 nucleotides
- Bulged bases
- 6OM0|1|t|C|1350, 6OM0|1|t|A|1354
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM0_058 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2931
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OM0|1|t|C|1346
6OM0|1|t|U|1347
6OM0|1|t|C|1348
6OM0|1|t|G|1349
6OM0|1|t|C|1350
6OM0|1|t|A|1351
6OM0|1|t|C|1352
6OM0|1|t|G|1353
6OM0|1|t|A|1354
6OM0|1|t|A|1355
6OM0|1|t|A|1356
6OM0|1|t|G|1357
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain M
- 60S ribosomal protein L13
- Chain O
- 60S ribosomal protein L15
- Chain Z
- 60S ribosomal protein L26
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