HL_6OM0_061
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCCUCUCCAGUCCGC
- Length
- 16 nucleotides
- Bulged bases
- 6OM0|1|t|C|1420, 6OM0|1|t|U|1421
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM0_061 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.1042
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.7
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 22
Unit IDs
6OM0|1|t|G|1417
6OM0|1|t|G|1418
6OM0|1|t|C|1419
6OM0|1|t|C|1420
6OM0|1|t|U|1421
6OM0|1|t|C|1422
6OM0|1|t|U|1423
6OM0|1|t|C|1424
6OM0|1|t|C|1425
6OM0|1|t|A|1426
6OM0|1|t|G|1427
6OM0|1|t|U|1428
6OM0|1|t|C|1429
6OM0|1|t|C|1430
6OM0|1|t|G|1431
6OM0|1|t|C|1432
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain H
- 60S ribosomal protein L7
- Chain R
- 60S ribosomal protein L18
- Chain c
- 60S ribosomal protein L29
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