HL_6OM0_077
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAGCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM0_077 not in the Motif Atlas
- Homologous match to HL_8C3A_033
- Geometric discrepancy: 0.1606
- The information below is about HL_8C3A_033
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
6OM0|1|t|C|2437
6OM0|1|t|G|2438
6OM0|1|t|A|2439
6OM0|1|t|G|2440
6OM0|1|t|C|2441
6OM0|1|t|G|2442
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain O
- 60S ribosomal protein L15
- Chain k
- 60S ribosomal protein L37
Coloring options: