HL_6OM6_025

3D structure

PDB id

6OM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCAACCCGAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM6|1|1|G|883
6OM6|1|1|U|884
6OM6|1|1|C|885
6OM6|1|1|A|886
6OM6|1|1|A|887
6OM6|1|1|C|888
6OM6|1|1|C|889
6OM6|1|1|C|890
6OM6|1|1|G|891
6OM6|1|1|A|892
6OM6|1|1|C|893

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain r

30S ribosomal protein S13