HL_6OM6_050
3D structure
- PDB id
- 6OM6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 6OM6|1|1|A|2030, 6OM6|1|1|A|2031, 6OM6|1|1|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM6_050 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1061
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6OM6|1|1|G|2027
6OM6|1|1|U|2028
6OM6|1|1|G|2029
6OM6|1|1|A|2030
6OM6|1|1|A|2031
6OM6|1|1|G|2032
6OM6|1|1|A|2033
6OM6|1|1|U|2034
6OM6|1|1|G|2035
6OM6|1|1|C|2036
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L21
- Chain b
- 50S ribosomal protein L32
Coloring options: