HL_6OPE_034
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OPE_034 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.0907
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6OPE|1|QV|G|31
6OPE|1|QV|C|32
6OPE|1|QV|U|33
6OPE|1|QV|C|34
6OPE|1|QV|A|35
6OPE|1|QV|U|36
6OPE|1|QV|A|37
6OPE|1|QV|A|38
6OPE|1|QV|C|39
Current chains
- Chain QV
- P-site tRNAfMet
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QI
- 30S ribosomal protein S9
- Chain QM
- 30S ribosomal protein S13
- Chain QX
- mRNA
Coloring options: