HL_6OPE_059

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAACAG

Length

7 nucleotides

Bulged bases

6OPE|1|RA|C|645

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OPE_059 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.2669

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6OPE|1|RA|C|641
6OPE|1|RA|G|642
6OPE|1|RA|A|643
6OPE|1|RA|A|644
6OPE|1|RA|C|645
6OPE|1|RA|A|646
6OPE|1|RA|G|647

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R6

50S ribosomal protein L33

Chain R8

50S ribosomal protein L35

Chain RP

50S ribosomal protein L15