3D structure

PDB id
6OPE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
CGUCAAG
Length
7 nucleotides
Bulged bases
6OPE|1|RA|U|2797
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OPE_106 not in the Motif Atlas
Geometric match to HL_1P6V_001
Geometric discrepancy: 0.3312
The information below is about HL_1P6V_001
Detailed Annotation
UNCG variation
Broad Annotation
UNCG variation
Motif group
HL_53890.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
15

Unit IDs

6OPE|1|RA|C|2794
6OPE|1|RA|G|2795
6OPE|1|RA|U|2797
6OPE|1|RA|C|2798
6OPE|1|RA|A|2799
6OPE|1|RA|A|2801
6OPE|1|RA|G|2802

Current chains

Chain RA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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