HL_6OPE_113
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OPE_113 not in the Motif Atlas
- Homologous match to HL_4LFB_003
- Geometric discrepancy: 0.2217
- The information below is about HL_4LFB_003
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
6OPE|1|XA|G|158
6OPE|1|XA|G|159
6OPE|1|XA|A|160
6OPE|1|XA|A|161
6OPE|1|XA|A|162
6OPE|1|XA|C|163
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XT
- 30S ribosomal protein S20
- Chain YT
- 50S ribosomal protein L19
Coloring options: