HL_6OPE_148
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUUCGAUCCC
- Length
- 11 nucleotides
- Bulged bases
- 6OPE|1|XY|U|54
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OPE_148 not in the Motif Atlas
- Homologous match to HL_4WQ1_225
- Geometric discrepancy: 0.5432
- The information below is about HL_4WQ1_225
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OPE|1|XY|G|52
6OPE|1|XY|G|53
6OPE|1|XY|U|54
6OPE|1|XY|U|55
6OPE|1|XY|C|56
6OPE|1|XY|G|57
6OPE|1|XY|A|58
6OPE|1|XY|U|59
6OPE|1|XY|C|60
6OPE|1|XY|C|61
6OPE|1|XY|C|62
Current chains
- Chain XY
- A-site tRNAAla(GGC) U32-A38
Nearby chains
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
- Chain YQ
- 50S ribosomal protein L16
- Chain YZ
- 50S ribosomal protein L25
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