HL_6OPE_151

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

6OPE|1|YA|G|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OPE_151 not in the Motif Atlas

Homologous match to HL_7RQB_003

Geometric discrepancy: 0.1168

The information below is about HL_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6OPE|1|YA|G|123
6OPE|1|YA|G|124
6OPE|1|YA|G|125
6OPE|1|YA|A|126
6OPE|1|YA|A|127
6OPE|1|YA|C|128

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y7

50S ribosomal protein L34

Chain YX

50S ribosomal protein L23