HL_6OPE_213
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OPE_213 not in the Motif Atlas
- Homologous match to HL_7RQB_064
- Geometric discrepancy: 0.0991
- The information below is about HL_7RQB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35490.2
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 299
Unit IDs
6OPE|1|YA|C|2658
6OPE|1|YA|G|2659
6OPE|1|YA|A|2660
6OPE|1|YA|G|2661
6OPE|1|YA|A|2662
6OPE|1|YA|G|2663
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YH
- 50S ribosomal protein L6
Coloring options: