HL_6ORD_008

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6ORD|1|QA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_008 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1308

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6ORD|1|QA|C|342
6ORD|1|QA|U|343
6ORD|1|QA|A|344
6ORD|1|QA|C|345
6ORD|1|QA|G|346
6ORD|1|QA|G|347

Current chains

Chain QA

16S rRNA

Nearby chains

Chain RO

50S ribosomal protein L14

Chain RT

50S ribosomal protein L19