HL_6ORD_030

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6ORD|1|QA|A|1447, 6ORD|1|QA|G|1456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_030 not in the Motif Atlas

Homologous match to HL_6CZR_102

Geometric discrepancy: 0.273

The information below is about HL_6CZR_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52463.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

6ORD|1|QA|C|1445
6ORD|1|QA|U|1446
6ORD|1|QA|A|1447
6ORD|1|QA|C|1452
6ORD|1|QA|G|1456
6ORD|1|QA|G|1457

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20