HL_6ORD_036

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUGGCAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_53597.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

31

Unit IDs

6ORD|1|QY|C|31
6ORD|1|QY|U|32
6ORD|1|QY|U|33
6ORD|1|QY|G|34
6ORD|1|QY|G|35
6ORD|1|QY|C|36
6ORD|1|QY|A|37
6ORD|1|QY|A|38
6ORD|1|QY|G|39

Current chains

Chain QY

A-site tRNAAla(GGC) U32-A38

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain QL

30S ribosomal protein S12

Chain QX

mRNA

Chain RA

Large subunit ribosomal RNA; LSU rRNA